SRX150746
GSM940317: MGG7= H3K4REH110907.M1 ChipSeq; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Blood
Cell type
REH
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
REH
chip antibody
H3K4me3
antibody catalog number
Abcam AB8580
cell type
REH

Sequenced DNA Library

library_name
GSM940317: MGG7= H3K4REH110907.M1_ChipSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
3749279
Reads aligned (%)
66.9
Duplicates removed (%)
4.9
Number of peaks
13902 (qval < 1E-05)

hg19

Number of total reads
3749279
Reads aligned (%)
66.7
Duplicates removed (%)
5.0
Number of peaks
13854 (qval < 1E-05)

Base call quality data from DBCLS SRA