Antigen

Antigen Class

TFs and others

Antigen

GTF2F1

Cell type

Cell type Class

Pluripotent stem cell

Cell type

hESC H1

NA

NA

Sample

source_name

H1-hESC

biomaterial_provider

WiCell Research Institute

lab

Stanford

lab description

Snyder - Stanford University

datatype

ChipSeq

datatype description

Chromatin IP Sequencing

cell

H1-hESC

cell organism

human

cell description

embryonic stem cells

cell karyotype

normal

cell lineage

inner cell mass

cell sex

M

treatment

None

treatment description

No special treatment or protocol applies

antibody

GTF2F1_(AB28179)

antibody antibodydescription

Rabbit polyclonal to TFIIF - Recombinant full length protein - RAP 74 subunit of TF11F. Antibody Target: GTF2F1

antibody targetdescription

RNA polymerase II transcription factor TFIIF is a heterodimer with 2 subunits: one, referred to as RAP74. TFIIF appears to assist TFIIB in recruiting RNA polymerase II into a preinitiation complex. It also affects RNA transcription by suppressing transient pausing of the polymerase at locations on the DNA template.

antibody vendorname

Abcam

antibody vendorid

ab28179

control

IgG-rab

control description

Input signal from Normal Rabbit IgG ChIP-seq.

control

IgG-rab

control description

Input signal from Normal Rabbit IgG ChIP-seq.

controlid

wgEncodeEH001834

replicate

1

Sequenced DNA Library

library_name

GSM935581: Stanford_ChipSeq_H1-hESC_GTF2F1_(AB28179)_IgG-rab

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer

hg38

Number of total reads

54896984

Reads aligned (%)

96.2

Duplicates removed (%)

5.1

Number of peaks

4417 (qval < 1E-05)

hg19

Number of total reads

54896984

Reads aligned (%)

95.5

Duplicates removed (%)

6.3

Number of peaks

2733 (qval < 1E-05)