Antigen

Antigen Class

TFs and others

Antigen

ZNF143

Cell type

Cell type Class

Uterus

Cell type

HeLa

Primary Tissue

Cervix

Tissue Diagnosis

Adenocarcinoma

Sample

source_name

HeLa-S3

biomaterial_provider

ATCC

lab

Stanford

lab description

Snyder - Stanford University

datatype

ChipSeq

datatype description

Chromatin IP Sequencing

cell

HeLa-S3

cell organism

human

cell description

cervical carcinoma

cell karyotype

cancer

cell lineage

ectoderm

cell sex

F

treatment

None

treatment description

No special treatment or protocol applies

antibody

Znf143_(16618-1-AP)

antibody antibodydescription

Rabbit polyclonal against human ZNF143 (amino acids 283-626)-6his fusion protein. Antibody Target: Znf143

antibody targetdescription

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates to efficient U6 RNA polymerase III transcription via its interaction with CHD8

antibody vendorname

Proteintech

antibody vendorid

16618-1-AP

control

IgG-rab

control description

Input signal from Normal Rabbit IgG ChIP-seq.

control

IgG-rab

control description

Input signal from Normal Rabbit IgG ChIP-seq.

controlid

wgEncodeEH000744

replicate

1

Sequenced DNA Library

library_name

GSM935436: Stanford_ChipSeq_HeLa-S3_Znf143_(16618-1-AP)_IgG-rab

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer

hg38

Number of total reads

57279254

Reads aligned (%)

97.4

Duplicates removed (%)

4.8

Number of peaks

12384 (qval < 1E-05)

hg19

Number of total reads

57279254

Reads aligned (%)

96.6

Duplicates removed (%)

6.2

Number of peaks

12479 (qval < 1E-05)