Antigen

Antigen Class

TFs and others

Antigen

MXI1

Cell type

Cell type Class

Pluripotent stem cell

Cell type

hESC H1

NA

NA

Sample

source_name

H1-hESC

biomaterial_provider

WiCell Research Institute

lab

Stanford

lab description

Snyder - Stanford University

datatype

ChipSeq

datatype description

Chromatin IP Sequencing

cell

H1-hESC

cell organism

human

cell description

embryonic stem cells

cell karyotype

normal

cell lineage

inner cell mass

cell sex

M

treatment

None

treatment description

No special treatment or protocol applies

antibody

Mxi1_(AF4185)

antibody antibodydescription

Goat IgG. Raised against E. coli-derived rhMxi1. Antibody Target: Mxi1

antibody targetdescription

Transcriptional repressor. Binds with MAX to form recognize the core sequence 5'-CAC[GA]TG-3', antagonizes MYC transcriptional activity by competing for MAX

antibody vendorname

R&D Systems

antibody vendorid

AF4185

control

IgG-rab

control description

Input signal from Normal Rabbit IgG ChIP-seq.

control

IgG-rab

control description

Input signal from Normal Rabbit IgG ChIP-seq.

controlid

wgEncodeEH001834

replicate

1

Sequenced DNA Library

library_name

GSM935293: Stanford_ChipSeq_H1-hESC_Mxi1_(AF4185)_IgG-rab

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer

hg38

Number of total reads

61783189

Reads aligned (%)

96.5

Duplicates removed (%)

5.2

Number of peaks

8668 (qval < 1E-05)

hg19

Number of total reads

61783189

Reads aligned (%)

95.8

Duplicates removed (%)

6.5

Number of peaks

8244 (qval < 1E-05)