Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
POU2F1

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
HeLa_Oct1
cell line
HeLa
chip antibody
mix of monoclonal antibodies YL8 and YL15
chip antibody reference
PMID 1495986, PMID 8628262

Sequenced DNA Library

library_name
GSM938416: OCT1_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg19

Number of total reads
40882951
Reads aligned (%)
52.4
Duplicates removed (%)
43.7
Number of peaks
1253 (qval < 1E-05)

hg38

Number of total reads
40882951
Reads aligned (%)
54.9
Duplicates removed (%)
41.6
Number of peaks
1086 (qval < 1E-05)

Base call quality data from DBCLS SRA