Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SCML2

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562
cell line
K562
transgene
none
epitope tag
none
antibody
SCML2 (in-house) batch# Rb1199-1004

Sequenced DNA Library

library_name
GSM937871: K562.SCML2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
19487823
Reads aligned (%)
57.7
Duplicates removed (%)
26.7
Number of peaks
1451 (qval < 1E-05)

hg38

Number of total reads
19487823
Reads aligned (%)
58.4
Duplicates removed (%)
26.1
Number of peaks
1436 (qval < 1E-05)

Base call quality data from DBCLS SRA