SRX149695
GSM937826: INPUT; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Embryo
Cell type
Embryonic brains
NA
NA

Attributes by original data submitter

Sample

source_name
neural stem cells
tissue
cerebral cortex
development stage
e12.5
genotype/variation
wild type
antibody
none

Sequenced DNA Library

library_name
GSM937826: INPUT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
27992136
Reads aligned (%)
76.8
Duplicates removed (%)
11.9
Number of peaks
678 (qval < 1E-05)

mm9

Number of total reads
27992136
Reads aligned (%)
76.6
Duplicates removed (%)
12.0
Number of peaks
751 (qval < 1E-05)

Base call quality data from DBCLS SRA