SRX149207
GSM936205: input DNA, rep3; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
B3
NA
NA

Attributes by original data submitter

Sample

source_name
Input data from HA-Ikaros transduced B3 cells
cell line
pre-B cell line B3
cell line reference
Brown et al. 1997
chip antibody
None

Sequenced DNA Library

library_name
GSM936205: input DNA, rep3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
15553703
Reads aligned (%)
96.9
Duplicates removed (%)
10.1
Number of peaks
407 (qval < 1E-05)

mm9

Number of total reads
15553703
Reads aligned (%)
96.6
Duplicates removed (%)
10.2
Number of peaks
466 (qval < 1E-05)

Base call quality data from DBCLS SRA