SRX149206
GSM936204: input DNA, rep2; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
B3
NA
NA

Attributes by original data submitter

Sample

source_name
Input data from Wildtype B3 Cells
cell line
pre-B cell line B3
cell line reference
Brown et al. 1997
chip antibody
None

Sequenced DNA Library

library_name
GSM936204: input DNA, rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
29384546
Reads aligned (%)
93.7
Duplicates removed (%)
18.7
Number of peaks
466 (qval < 1E-05)

mm9

Number of total reads
29384546
Reads aligned (%)
93.6
Duplicates removed (%)
18.8
Number of peaks
563 (qval < 1E-05)

Base call quality data from DBCLS SRA