SRX149200
GSM936125: input control S2-PH ChIPSeq; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S2 cell line
cell line
S2 experssing biotin-PH
chip antibody
none
facs sorting antibody
H3
cell cycle profile
asynchronous

Sequenced DNA Library

library_name
GSM936125: input_control_S2-PH_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
22481092
Reads aligned (%)
94.5
Duplicates removed (%)
22.2
Number of peaks
3330 (qval < 1E-05)

dm3

Number of total reads
22481092
Reads aligned (%)
95.8
Duplicates removed (%)
19.5
Number of peaks
3985 (qval < 1E-05)

Base call quality data from DBCLS SRA