Toggle navigation
Peak Browser
Enrichment Analysis
Diff Analysis
Target Genes
Colocalization
Publications
Docs
Search
Go
Find By ID
Visualize
Install and launch IGV before selecting data to visualize
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Error connecting to IGV?
Analyze
For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: Input control
wikigenes
PDBj
CellType: S2
ATCC
MeSH
RIKEN BRC
SRX149199
GSM936124: input mitotic S2-PH ChIPSeq; Drosophila melanogaster; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Input control
Antigen
Input control
Cell type
Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage
Attributes by original data submitter
Sample
source_name
S2 cell line
cell line
S2 experssing biotin-PH
chip antibody
none
facs sorting antibody
H3S10p
cell cycle profile
mitotic
Sequenced DNA Library
library_name
GSM936124: input_mitotic_S2-PH_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina HiSeq 2000
Where can I get the processing logs?
Read processing pipeline
log
dm6
Number of total reads
24821883
Reads aligned (%)
94.7
Duplicates removed (%)
20.8
Number of peaks
3460 (qval < 1E-05)
dm3
Number of total reads
24821883
Reads aligned (%)
95.7
Duplicates removed (%)
18.2
Number of peaks
3907 (qval < 1E-05)
Base call quality data from
DBCLS SRA