Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S2 cell line
cell line
S2 experssing biotin-PH
chip antibody
none (streptavidin-coated beads used to pulldown biotinlyated PH)
facs sorting antibody
H3S10p
cell cycle profile
mitotic

Sequenced DNA Library

library_name
GSM936122: PH_mitotic_S2-PH_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm6

Number of total reads
28251307
Reads aligned (%)
70.4
Duplicates removed (%)
55.5
Number of peaks
3952 (qval < 1E-05)

dm3

Number of total reads
28251307
Reads aligned (%)
71.3
Duplicates removed (%)
52.1
Number of peaks
4737 (qval < 1E-05)

Base call quality data from DBCLS SRA