Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Embryonic stem cell
tissue
Embryonic stem cell
strain
E14
ChIP
none, input-DNA

Sequenced DNA Library

library_name
GSM936112: ES-nonWGA-input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
20533307
Reads aligned (%)
93.6
Duplicates removed (%)
11.4
Number of peaks
695 (qval < 1E-05)

mm9

Number of total reads
20533307
Reads aligned (%)
93.4
Duplicates removed (%)
11.6
Number of peaks
767 (qval < 1E-05)

Base call quality data from DBCLS SRA