SRX149183
GSM936108: Replicate1-ES-WGA-input; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Embryonic stem cell
tissue
Embryonic stem cell
strain
E14
ChIP
none, input-DNA

Sequenced DNA Library

library_name
GSM936108: Replicate1-ES-WGA-input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
26569635
Reads aligned (%)
78.1
Duplicates removed (%)
20.9
Number of peaks
16647 (qval < 1E-05)

mm9

Number of total reads
26569635
Reads aligned (%)
78.0
Duplicates removed (%)
21.0
Number of peaks
16629 (qval < 1E-05)

Base call quality data from DBCLS SRA