SRX148804
GSM932932: Control Bio-ChIP-seq mature B input [8095], 1; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Biotin

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Mature B
genotype
Rosa26(BirA/BirA)
extraction method
Ex vivo
tissue
Lymph Nodes
strain
C57BL/6
antibody
Dynabeads M-280 Streptavidin (Invitrogen)

Sequenced DNA Library

library_name
GSM932932: Control Bio-ChIP-seq mature B input [8095], 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
6005765
Reads aligned (%)
43.6
Duplicates removed (%)
17.0
Number of peaks
231 (qval < 1E-05)

mm9

Number of total reads
6005765
Reads aligned (%)
43.5
Duplicates removed (%)
17.9
Number of peaks
253 (qval < 1E-05)

Base call quality data from DBCLS SRA