Curated Sample Data


Genome
ce10
Antigen Class
Histone
Antigen
H3K9me3
Cell type Class
Adult
Cell type
Adult

Cell type information


NA
NA

Attributes by Original Data Submitter


source_name
adult C. elegans
strain
SS104, glp-4(bn2)
developmental stage
adult
RNAi target
chrI:6,907,993-6,909,159 (smg-1)
antibody
H3K9me3
antibody manufacturer
Abcam

Metadata from Sequence Read Archive

Library Description


library_name
GSM932877: H3K9me3 chip-IP from glp-4(bn2) mutant C. elegans that underwent smg-1 RNAi
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Platform Information


instrument_model
Illumina Genome Analyzer IIx

External Database Query

Logs in read processing pipeline


Number of total reads
14860990
Reads aligned (%)
91.3
Duplicates removed (%)
85.0
Number of peaks
1451 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA