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Target Genes (TSS ± 10kb)
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For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: ATF7IP
wikigenes
PDBj
CellType: WM262
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX148012
GSM697629: ChIP-Seq for MCAF1 in WM262 melanoma cells
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
ATF7IP
Cell type
Cell type Class
Epidermis
Cell type
WM262
NA
NA
Attributes by original data submitter
Sample
source_name
Melanomas
chip antibody
MCAF1
antibody catalog number
A300-169A
antibody vendor
Bethyl
antibody lot number
A300-169A-1
cell type
WM262
Sequenced DNA Library
library_name
GSM697629: ChIP-Seq for MCAF1 in WM262 melanoma cells
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer II
Where can I get the processing logs?
Read processing pipeline
log
hg19
Number of total reads
21240584
Reads aligned (%)
77.8
Duplicates removed (%)
47.7
Number of peaks
464 (qval < 1E-05)
hg38
Number of total reads
21240584
Reads aligned (%)
78.3
Duplicates removed (%)
46.4
Number of peaks
345 (qval < 1E-05)
Base call quality data from
DBCLS SRA