Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
embryonic stem cells
chip antibody
IgG (Thermo scientific, 23212, lot LI150449)
cell type
embryonic stem cells
transfection/genotype
shScr

Sequenced DNA Library

library_name
GSM930145: IgG_Scr
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
50951709
Reads aligned (%)
84.2
Duplicates removed (%)
75.0
Number of peaks
499 (qval < 1E-05)

mm9

Number of total reads
50951709
Reads aligned (%)
84.1
Duplicates removed (%)
75.2
Number of peaks
521 (qval < 1E-05)

Base call quality data from DBCLS SRA