Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
Monocytes
MeSH Description
Large, phagocytic mononuclear leukocytes produced in the vertebrate BONE MARROW and released into the BLOOD; contain a large, oval or somewhat indented nucleus surrounded by voluminous cytoplasm and numerous organelles.

Attributes by original data submitter

Sample

source_name
Peripheral blood
cell type
Monocytes
individual/replicate
Indiv-D + Indiv-E
f-seq parameter
8

Sequenced DNA Library

library_name
GSM929905: FAIRE_MO_Indiv-D-E
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
116147994
Reads aligned (%)
97.4
Duplicates removed (%)
0.7
Number of peaks
4512 (qval < 1E-05)

hg19

Number of total reads
116147994
Reads aligned (%)
96.3
Duplicates removed (%)
1.3
Number of peaks
2789 (qval < 1E-05)

Base call quality data from DBCLS SRA