SRX147682
GSM929915: Input DNA; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Others
Cell type
UVSS1
NA
NA

Attributes by original data submitter

Sample

source_name
UVSS1KO Cells
cell type
SV40 Immortalized Fibroblast
chip antibody
none

Sequenced DNA Library

library_name
GSM929915: Input_DNA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
4735921
Reads aligned (%)
98.2
Duplicates removed (%)
0.8
Number of peaks
59 (qval < 1E-05)

hg19

Number of total reads
4735921
Reads aligned (%)
97.6
Duplicates removed (%)
1.3
Number of peaks
79 (qval < 1E-05)

Base call quality data from DBCLS SRA