SRX147681
GSM929914: CSB-PGBD3 ChIP-Seq; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ERCC6

Cell type

Cell type Class
Others
Cell type
UVSS1
NA
NA

Attributes by original data submitter

Sample

source_name
UVSS1KO Cells
cell type
SV40 Immortalized Fibroblast
chip antibody
Mouse monoclonal anti-CSB N Terminus (1B1)

Sequenced DNA Library

library_name
GSM929914: CSB-PGBD3_ChIP-Seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
14263776
Reads aligned (%)
94.4
Duplicates removed (%)
1.9
Number of peaks
1990 (qval < 1E-05)

hg19

Number of total reads
14263776
Reads aligned (%)
93.6
Duplicates removed (%)
2.1
Number of peaks
1977 (qval < 1E-05)

Base call quality data from DBCLS SRA