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For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: ERCC6
wikigenes
PDBj
CellType: UVSS1
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX147681
GSM929914: CSB-PGBD3 ChIP-Seq; Homo sapiens; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
ERCC6
Cell type
Cell type Class
Others
Cell type
UVSS1
NA
NA
Attributes by original data submitter
Sample
source_name
UVSS1KO Cells
cell type
SV40 Immortalized Fibroblast
chip antibody
Mouse monoclonal anti-CSB N Terminus (1B1)
Sequenced DNA Library
library_name
GSM929914: CSB-PGBD3_ChIP-Seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer II
Where can I get the processing logs?
Read processing pipeline
log
hg19
Number of total reads
14263776
Reads aligned (%)
183.4
Duplicates removed (%)
2.1
Number of peaks
1977 (qval < 1E-05)
hg38
Number of total reads
14263776
Reads aligned (%)
185.2
Duplicates removed (%)
1.9
Number of peaks
1990 (qval < 1E-05)
Base call quality data from
DBCLS SRA