Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Blood
Cell type
Monocytes
MeSH Description
Large, phagocytic mononuclear leukocytes produced in the vertebrate BONE MARROW and released into the BLOOD; contain a large, oval or somewhat indented nucleus surrounded by voluminous cytoplasm and numerous organelles.

Attributes by original data submitter

Sample

source_name
Monocytes
treatment
24hrs Beta glucan treated (day1)
cell type
primary monocyte
antibody
H3K4me3
antibody manufacturer
Diagenode

Sequenced DNA Library

library_name
GSM929689: H3K4me3 day1 BG ChIPseq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
87745730
Reads aligned (%)
86.5
Duplicates removed (%)
41.3
Number of peaks
36624 (qval < 1E-05)

hg19

Number of total reads
87745730
Reads aligned (%)
86.1
Duplicates removed (%)
41.7
Number of peaks
36525 (qval < 1E-05)

Base call quality data from DBCLS SRA