Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562 cells
passage
3-5
chip-antibody
N-20 (Santa Cruz)
cell line
K562

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
NEBNext Ultra DNA Library Prep Kit for Illumina

Sequencing Platform

instrument_model
Illumina HiSeq 1500

hg38

Number of total reads
200988201
Reads aligned (%)
0.0
Duplicates removed (%)
39.0
Number of peaks
24429 (qval < 1E-05)

hg19

Number of total reads
200988201
Reads aligned (%)
0.0
Duplicates removed (%)
39.2
Number of peaks
24099 (qval < 1E-05)

Base call quality data from DBCLS SRA