SRX147008
GSM929091: ChIP Seq Input IMR90; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Lung
Cell type
IMR-90
Primary Tissue
Lung
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
Lung fibroblast
strain
IMR90
antibody
none
cell type
Lung fibroblast

Sequenced DNA Library

library_name
GSM929091: ChIP_Seq_Input_IMR90
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
18556628
Reads aligned (%)
93.9
Duplicates removed (%)
3.5
Number of peaks
618 (qval < 1E-05)

hg19

Number of total reads
18556628
Reads aligned (%)
93.2
Duplicates removed (%)
4.8
Number of peaks
1023 (qval < 1E-05)

Base call quality data from DBCLS SRA