SRX147007
GSM929090: ChIP Seq p300 IMR90; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
EP300

Cell type

Cell type Class
Lung
Cell type
IMR-90
Primary Tissue
Lung
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
Lung fibroblast
strain
IMR90
antibody
p300 [Manufacturer: Santa Cruz, Catalog:SC-585XS, Lot#: E2209]
cell type
Lung fibroblast

Sequenced DNA Library

library_name
GSM929090: ChIP_Seq_p300_IMR90
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads
46047155
Reads aligned (%)
48.5
Duplicates removed (%)
47.6
Number of peaks
34822 (qval < 1E-05)

hg38

Number of total reads
46047155
Reads aligned (%)
49.3
Duplicates removed (%)
46.9
Number of peaks
34866 (qval < 1E-05)

Base call quality data from DBCLS SRA