Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
msl-3

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
MSL3 ChIP-Seq
cell type
S2
ip antibody
polyclonal rabbit MSL3, crude serum
shearing technologie
Bioruptor

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm3

Number of total reads
33536924
Reads aligned (%)
97.5
Duplicates removed (%)
23.4
Number of peaks
18634 (qval < 1E-05)

dm6

Number of total reads
33536924
Reads aligned (%)
97.3
Duplicates removed (%)
25.8
Number of peaks
19653 (qval < 1E-05)

Base call quality data from DBCLS SRA