Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
iPS cells
NA
NA

Attributes by original data submitter

Sample

source_name
Mouse V19-OSKM Aberrant iPS cells, Utx-/Y, Clone #1
chip antibody
none
strain
V19-OSKM
doxycycline induction
none
genotype/variation
KO Utx-/Y

Sequenced DNA Library

library_name
GSM928471: MEF_KO_iPS1_WCE
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
13534389
Reads aligned (%)
97.4
Duplicates removed (%)
14.7
Number of peaks
410 (qval < 1E-05)

mm9

Number of total reads
13534389
Reads aligned (%)
97.0
Duplicates removed (%)
14.8
Number of peaks
424 (qval < 1E-05)

Base call quality data from DBCLS SRA