Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Mouse V6.5 ESCs
chip antibody
none
strain
V6.5
doxycycline induction
none
genotype/variation
WT Utx+/Y

Sequenced DNA Library

library_name
GSM928465: V65_WCE
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
11168664
Reads aligned (%)
96.6
Duplicates removed (%)
23.2
Number of peaks
446 (qval < 1E-05)

mm9

Number of total reads
11168664
Reads aligned (%)
96.3
Duplicates removed (%)
23.4
Number of peaks
452 (qval < 1E-05)

Base call quality data from DBCLS SRA