SRX146461
GSM928335: Snyder Pefl1 EFL1 GFP L1 rep2 extraction2 seq1 aliquote 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
efl-1

Cell type

Cell type Class
Larvae
Cell type
L1
NA
NA

Attributes by original data submitter

Sample

source_name
Snyder_Pefl1_EFL1_GFP_L1_rep2
strain
YL424(official name : YL424 genotype : unc-119(ed3); vrIs68[pEFL-1::EFL-1::GFP FLAG: EFL-1 3?UTR genotype : unc-119 (+)] outcross : 3 mutagen : Bombard tags : GFP::3xFlag description : made_by : )
developmental stage
fed L1
genotype
unc-119(ed3); vrIs68[pEFL-1::EFL-1::GFP FLAG: EFL-1 3?UTR
Sex
hermaphrodite

Sequenced DNA Library

library_name
GSM928335: Snyder_Pefl1_EFL1_GFP_L1_rep2 extraction2_seq1 aliquote 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
5303031
Reads aligned (%)
57.4
Duplicates removed (%)
35.0
Number of peaks
5748 (qval < 1E-05)

ce10

Number of total reads
5303031
Reads aligned (%)
57.4
Duplicates removed (%)
35.0
Number of peaks
5749 (qval < 1E-05)

Base call quality data from DBCLS SRA