Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
efl-1

Cell type

Cell type Class
Larvae
Cell type
L1
NA
NA

Attributes by original data submitter

Sample

source_name
Snyder_Pefl1_EFL1_GFP_L1_rep1
strain
YL424(official name : YL424 genotype : unc-119(ed3); vrIs68[pEFL-1::EFL-1::GFP FLAG: EFL-1 3?UTR genotype : unc-119 (+)] outcross : 3 mutagen : Bombard tags : GFP::3xFlag description : made_by : )
developmental stage
fed L1
genotype
unc-119(ed3); vrIs68[pEFL-1::EFL-1::GFP FLAG: EFL-1 3?UTR
Sex
hermaphrodite

Sequenced DNA Library

library_name
GSM928334: Snyder_Pefl1_EFL1_GFP_L1_rep1 extraction1_seq1 aliquote 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

ce10

Number of total reads
4285635
Reads aligned (%)
88.1
Duplicates removed (%)
7.9
Number of peaks
1670 (qval < 1E-05)

ce11

Number of total reads
4285635
Reads aligned (%)
88.1
Duplicates removed (%)
7.9
Number of peaks
1671 (qval < 1E-05)

Base call quality data from DBCLS SRA