Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Adult
Cell type
Young adult
NA
NA

Attributes by original data submitter

Sample

source_name
Snyder_Ppie1_DPL1_Input_YA_rep2
strain
YL390(official name : YL390 genotype : unc119(ed3); vrIs48 [pPIE-1::DPL-1::GFP FLAG: DPL-1 3?UTR genotype : unc-119 (+)] outcross : 3 mutagen : Bombard tags : GFP::3xFlag description : made_by : )
developmental stage
Young Adult
genotype
unc119(ed3); vrIs48 [pPIE-1::DPL-1::GFP FLAG: DPL-1 3?UTR
Sex
hermaphrodite

Sequenced DNA Library

library_name
GSM928329: Snyder_Ppie1_DPL1_Input_YA_rep2 extraction2_seq1 aliquote 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

ce11

Number of total reads
3061797
Reads aligned (%)
98.0
Duplicates removed (%)
4.7
Number of peaks
300 (qval < 1E-05)

ce10

Number of total reads
3061797
Reads aligned (%)
98.0
Duplicates removed (%)
4.7
Number of peaks
301 (qval < 1E-05)

Base call quality data from DBCLS SRA