Antigen

Antigen Class

Histone

Antigen

H3K27ac

Cell type

Cell type Class

Digestive tract

Cell type

SNU-16

Primary Tissue

Stomach

Site of Extraction

Ascites

Tissue Diagnosis

Carcinoma

Sample

source_name

SNU016-H3K27ac

cell line

SNU016

chip antibody

H3K27ac

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

A protocol generated at Myer`s laboratory (http://hudsonalpha.org/myers-lab/protocols) libraries were prepared for sequencing using standard Illumina protocols

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

31466058

Reads aligned (%)

6.1

Duplicates removed (%)

1.0

Number of peaks

211 (qval < 1E-05)

hg19

Number of total reads

31466058

Reads aligned (%)

6.0

Duplicates removed (%)

1.3

Number of peaks

218 (qval < 1E-05)