SRX145797
GSM926623: Control IgG; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Neural
Cell type
Corticotrophs
MeSH Description
Anterior pituitary cells that produce ADRENOCORTICOTROPHIC HORMONE.

Attributes by original data submitter

Sample

source_name
AtT-20 corticotroph cells treated with Control IgG
cell line
AtT-20
cell type
pituitary corticotroph cell
treatment
LIF, Dex+LIF, Dex (control pooled from different experiments)
chip antibody
rabbit IgG (G2018, Sigma)

Sequenced DNA Library

library_name
GSM926623: Control IgG
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
59664040
Reads aligned (%)
96.6
Duplicates removed (%)
27.9
Number of peaks
506 (qval < 1E-05)

mm9

Number of total reads
59664040
Reads aligned (%)
96.4
Duplicates removed (%)
27.9
Number of peaks
657 (qval < 1E-05)

Base call quality data from DBCLS SRA