Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Bone

Cell type

Chondrocytes

MeSH Description

Polymorphic cells that form cartilage.

Sample

source_name

Input DNA for GFP sample

strain

C57BL/6

cell type

Chondrocytes

genotype/variation

wild-type

transduction

GFP control adenovirus

chip antibody

None

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Lysates were clarified from sonicated nuclei and histone-DNA complexes were isolated with antibody Libraries were prepared according to NuGene Ultralow library prep kit V2

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

16662907

Reads aligned (%)

98.6

Duplicates removed (%)

7.2

Number of peaks

127 (qval < 1E-05)

mm9

Number of total reads

16662907

Reads aligned (%)

98.5

Duplicates removed (%)

7.5

Number of peaks

103 (qval < 1E-05)