Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Tal1

Cell type

Cell type Class
Embryo
Cell type
Embryonic erythroblasts
NA
NA

Attributes by original data submitter

Sample

source_name
Erythrobl
biomaterial_provider
Mitch Weiss lab
lab
PSU-m
lab description
Hardison - Penn State University
datatype
ChipSeq
datatype description
Chromatin IP Sequencing
cell
Erythrobl
cell organism
mouse
cell description
Erythroblast, ter119+ cells from liver
cell sex
B
antibody
TAL1_(SC-12984)
antibody antibodydescription
goat polyclonal antibody; epitope mapping at the C-terminus of TAL1 of human origin, recommended for detection of TAL1 of mouse, rat and human origin. Antibody Target: TAL1
antibody targetdescription
TAL1 (also designated SCL) is a serine phosphoprotein and basic helix-loop-helix transcription factor known to regulate embryonic hematopoiesis.
antibody vendorname
Santa Cruz Biotech
antibody vendorid
sc-12984
age
E14.5
age description
Embryonic day 14.5
control
Input
control description
Control signal which may be subtracted from experimental raw signal before peaks are called.
controlid
wgEncodeEM002350
replicate
1
strain
CD-1
strain description
Multipurpose mouse used for safety testing, aging studies, surgical models and pseudopregnancy.

Sequenced DNA Library

library_name
GSM923582: PSU_ChipSeq_Erythrobl_TAL1_(SC-12984)
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
259638284
Reads aligned (%)
90.0
Duplicates removed (%)
12.1
Number of peaks
7081 (qval < 1E-05)

mm9

Number of total reads
259638284
Reads aligned (%)
89.8
Duplicates removed (%)
12.0
Number of peaks
7231 (qval < 1E-05)

Base call quality data from DBCLS SRA