Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Tal1

Cell type

Cell type Class
Blood
Cell type
G1E-ER4+E2
Tissue
Blood
Lineage
cellLine
Description
Gata1 restored erythroid cells, differentiation induced by estradiol (E2)

Attributes by original data submitter

Sample

source_name
G1E-ER4
biomaterial_provider
Mitch Weiss lab
lab
PSU-m
lab description
Hardison - Penn State University
datatype
ChipSeq
datatype description
Chromatin IP Sequencing
cell
G1E-ER4
cell organism
mouse
cell description
Gata1 restored erythroid cells, differentiation induced by estradiol (E2)
cell sex
M
antibody
TAL1_(SC-12984)
antibody antibodydescription
goat polyclonal antibody; epitope mapping at the C-terminus of TAL1 of human origin, recommended for detection of TAL1 of mouse, rat and human origin. Antibody Target: TAL1
antibody targetdescription
TAL1 (also designated SCL) is a serine phosphoprotein and basic helix-loop-helix transcription factor known to regulate embryonic hematopoiesis.
antibody vendorname
Santa Cruz Biotech
antibody vendorid
sc-12984
age
E0
age description
Embryonic day 0 (stem cell)
control
Input
control description
Control signal which may be subtracted from experimental raw signal before peaks are called.
controlid
wgEncodeEM001921
replicate
1
strain
129
strain description
Strain 129, has widely available embryonic stem cells

Sequenced DNA Library

library_name
GSM923576: PSU_ChipSeq_G1E-ER4_TAL1_(SC-12984)
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
35199872
Reads aligned (%)
55.5
Duplicates removed (%)
7.3
Number of peaks
2646 (qval < 1E-05)

mm9

Number of total reads
35199872
Reads aligned (%)
55.5
Duplicates removed (%)
7.4
Number of peaks
2660 (qval < 1E-05)

Base call quality data from DBCLS SRA