Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

GM12872

Tissue

blood

Lineage

mesoderm

Description

B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed

Sample

source_name

IgG ChIP vehicle treated

biomaterial_provider

GM06993

biomaterial_provider

GM07000

biomaterial_provider

GM11882

biomaterial_provider

GM11992

biomaterial_provider

GM12763

biomaterial_provider

GM12872

cell type

lymphoblastoid

cell line

GM06993, GM07000, GM11882, GM11992, GM12763, GM12872

chip antibody

rabbit IgG antibody (Invitrogen)

Sequenced DNA Library

library_name

GSM922974: IgG ChIP vehicle treated

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer

hg38

Number of total reads

16389204

Reads aligned (%)

95.8

Duplicates removed (%)

88.4

Number of peaks

46 (qval < 1E-05)

hg19

Number of total reads

16389204

Reads aligned (%)

94.5

Duplicates removed (%)

89.5

Number of peaks

57 (qval < 1E-05)