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For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
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For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: NFE2L2
wikigenes
PDBj
CellType: Lymphoblastoid cell line
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX144523
GSM922968: NRF2 ChIP SFN treated rep3; Homo sapiens; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
NFE2L2
Cell type
Cell type Class
Blood
Cell type
Lymphoblastoid cell line
Tissue
blood
Lineage
mesoderm
Description
parental cell type to lymphoblastoid cell lines
Attributes by original data submitter
Sample
source_name
NRF2 ChIP SFN treated
biomaterial_provider
GM07000
biomaterial_provider
GM11882
cell type
lymphoblastoid
cell line
GM07000, GM11882
chip antibody
rabbit monoclonal anti-NRF2 (Epitomics, Clone ID EP1808Y)
Sequenced DNA Library
library_name
GSM922968: NRF2 ChIP SFN treated rep3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer
Where can I get the processing logs?
Read processing pipeline
log
hg38
Number of total reads
14919604
Reads aligned (%)
92.1
Duplicates removed (%)
90.7
Number of peaks
44 (qval < 1E-05)
hg19
Number of total reads
14919604
Reads aligned (%)
91.3
Duplicates removed (%)
91.7
Number of peaks
51 (qval < 1E-05)
Base call quality data from
DBCLS SRA