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For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
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For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
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For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: NFE2L2
wikigenes
PDBj
CellType: Lymphoblastoid cell line
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX144521
GSM922966: NRF2 ChIP SFN treated rep1; Homo sapiens; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
NFE2L2
Cell type
Cell type Class
Blood
Cell type
Lymphoblastoid cell line
Tissue
blood
Lineage
mesoderm
Description
parental cell type to lymphoblastoid cell lines
Attributes by original data submitter
Sample
source_name
NRF2 ChIP SFN treated
biomaterial_provider
GM11992
biomaterial_provider
GM12763
cell type
lymphoblastoid
cell line
GM11992, GM12763
chip antibody
rabbit monoclonal anti-NRF2 (Epitomics, Clone ID EP1808Y)
Sequenced DNA Library
library_name
GSM922966: NRF2 ChIP SFN treated rep1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer
Where can I get the processing logs?
Read processing pipeline
log
hg38
Number of total reads
9340414
Reads aligned (%)
71.2
Duplicates removed (%)
80.0
Number of peaks
123 (qval < 1E-05)
hg19
Number of total reads
9340414
Reads aligned (%)
69.1
Duplicates removed (%)
81.1
Number of peaks
155 (qval < 1E-05)
Base call quality data from
DBCLS SRA