Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Blood
Cell type
RAJI
Primary Tissue
Blood
Tissue Diagnosis
Malignant Lymphoma - Burkitts Type

Attributes by original data submitter

Sample

source_name
Raji-cells
cell line
Raji-cells
genotype/variation
Wild-type
cell type
Burkitt's lymphoma
ChIP
Chromatin IP against Total PolII

Sequenced DNA Library

library_name
GSM920942: PolII_N20_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
81310269
Reads aligned (%)
93.4
Duplicates removed (%)
23.9
Number of peaks
11373 (qval < 1E-05)

hg19

Number of total reads
81310269
Reads aligned (%)
92.6
Duplicates removed (%)
25.3
Number of peaks
11872 (qval < 1E-05)

Base call quality data from DBCLS SRA