Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SNAPC4

Cell type

Cell type Class
Breast
Cell type
MCF 10A
Primary Tissue
Breast
Tissue Diagnosis
Fibrocystic Disease

Attributes by original data submitter

Sample

source_name
MCF10A
cell line
non-tumorigenic epithelial cell line MCF 10A
chip antibody
anti-SNAPC 190 (SNAAD17A) mouse monoclonal (Santa Cruz, sc-81379)

Sequenced DNA Library

library_name
GSM917815: SNAPC4
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg19

Number of total reads
30580707
Reads aligned (%)
75.1
Duplicates removed (%)
22.5
Number of peaks
1286 (qval < 1E-05)

hg38

Number of total reads
30580707
Reads aligned (%)
77.4
Duplicates removed (%)
20.9
Number of peaks
1178 (qval < 1E-05)

Base call quality data from DBCLS SRA