Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Cardiovascular
Cell type
HAEC
Primary Tissue
Aorta
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
HAEC_input_control
cell line
HAEC
cell type
Primary Human Aortic Endothelial Cells
passages
Passage 4-6

Sequenced DNA Library

library_name
GSM916983: HAEC input control2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg38

Number of total reads
26836908
Reads aligned (%)
95.8
Duplicates removed (%)
2.9
Number of peaks
1079 (qval < 1E-05)

hg19

Number of total reads
26836908
Reads aligned (%)
95.0
Duplicates removed (%)
4.3
Number of peaks
1279 (qval < 1E-05)

Base call quality data from DBCLS SRA