Toggle navigation
Peak Browser
Enrichment Analysis
Diff Analysis
Target Genes
Colocalization
Publications
Docs
Search
Go
Find By ID
Visualize
Install and launch IGV before selecting data to visualize
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Error connecting to IGV?
Analyze
For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: H3K9K14ac
wikigenes
PDBj
CellType: HAEC
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX143121
GSM916976: HAEC H3K9/14ac TSA2; Homo sapiens; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Histone
Antigen
H3K9K14ac
Cell type
Cell type Class
Cardiovascular
Cell type
HAEC
Primary Tissue
Aorta
Tissue Diagnosis
Normal
Attributes by original data submitter
Sample
source_name
HAEC_H3K9/14ac_500nM TSA_12h
cell line
HAEC
cell type
Primary Human Aortic Endothelial Cells
passages
Passage 4-6
chip antibody vendor
Millipore
Sequenced DNA Library
library_name
GSM916976: HAEC H3K9/14ac TSA2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer IIx
Where can I get the processing logs?
Read processing pipeline
log
hg38
Number of total reads
26781725
Reads aligned (%)
99.3
Duplicates removed (%)
3.3
Number of peaks
1795 (qval < 1E-05)
hg19
Number of total reads
26781725
Reads aligned (%)
99.0
Duplicates removed (%)
3.5
Number of peaks
1796 (qval < 1E-05)
Base call quality data from
DBCLS SRA