Antigen

Antigen Class

TFs and others

Antigen

Cebpb

Cell type

Cell type Class

Muscle

Cell type

C2C12

Primary Tissue

Skeletal Muscle

Tissue Diagnosis

NOS

Sample

source_name

C2C12

biomaterial_provider

Barbara Wold lab

lab

Caltech-m

lab description

Wold - Califonia Institute of Technology

datatype

ChipSeq

datatype description

Chromatin IP Sequencing

cell

C2C12

cell organism

mouse

cell description

Myoblast cell line derived from thigh muscle of C3H mice after crush injury

cell sex

F

antibody

CEBPB

antibody description

Rabbit polyclonal IgG. Antibody Target: CEBPB

antibody targetdescription

epitope mapping at the C-terminus of C/EBP-beta of rat origin

antibody vendorname

Santa Cruz Biotech

antibody vendorid

sc-150

control

Control_50bp

control description

This data represents a control being compared to experiments using read length of 50 bp

treatment

None

treatment description

No special treatment or protocol applies

age

immortalized

age description

Immortal cells

control

Control_50bp

control description

This data represents a control being compared to experiments using read length of 50 bp

controlid

11612

labexpid

11942

labversion

Myoblast

replicate

1

strain

C3H

strain description

Strain C3H, Very related to C57BL/6

Sequenced DNA Library

library_name

GSM915179: Caltech_ChipSeq_C2C12_CEBPB_Control_50bp

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

34256616

Reads aligned (%)

73.5

Duplicates removed (%)

40.6

Number of peaks

16326 (qval < 1E-05)

mm9

Number of total reads

34256616

Reads aligned (%)

73.2

Duplicates removed (%)

40.6

Number of peaks

16395 (qval < 1E-05)