Antigen

Antigen Class

TFs and others

Antigen

Srf

Cell type

Cell type Class

Muscle

Cell type

C2C12

Primary Tissue

Skeletal Muscle

Tissue Diagnosis

NOS

Sample

source_name

C2C12

biomaterial_provider

Barbara Wold lab

lab

Caltech-m

lab description

Wold - Califonia Institute of Technology

datatype

ChipSeq

datatype description

Chromatin IP Sequencing

cell

C2C12

cell organism

mouse

cell description

Myoblast cell line derived from thigh muscle of C3H mice after crush injury

cell sex

F

antibody

SRF

antibody description

Rabbit polyclonal. Antibody Target: SRF

antibody targetdescription

Serum response transcription factor

antibody vendorname

Santa Cruz Biotech

antibody vendorid

sc-335

control

Control_32bp

control description

This data represents a control being compared to experiments using read length of 32 bp

treatment

EqS_2.0pct_24hr

treatment description

24 h with 2.0% Equine Serum and Insulin (Wold)

age

immortalized

age description

Immortal cells

control

Control_32bp

control description

This data represents a control being compared to experiments using read length of 32 bp

controlid

10007

labexpid

10335

labversion

Myocyte

labversion description

Myocyte

replicate

1

strain

C3H

strain description

Strain C3H, Very related to C57BL/6

Sequenced DNA Library

library_name

GSM915168: Caltech_ChipSeq_C2C12_SRF_Control_32bp_EqS_2.0pct_24hr

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

27760901

Reads aligned (%)

79.5

Duplicates removed (%)

4.3

Number of peaks

6107 (qval < 1E-05)

mm9

Number of total reads

27760901

Reads aligned (%)

79.4

Duplicates removed (%)

4.5

Number of peaks

6113 (qval < 1E-05)