SRX142128
GSM915229: input DNA; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Embryonic stem cells
cell type
wild type ES cells
passage
15-18
strain
C57BL/6
antibody
none

Sequenced DNA Library

library_name
GSM915229: input DNA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
21231912
Reads aligned (%)
93.7
Duplicates removed (%)
8.1
Number of peaks
539 (qval < 1E-05)

mm9

Number of total reads
21231912
Reads aligned (%)
93.5
Duplicates removed (%)
8.2
Number of peaks
610 (qval < 1E-05)

Base call quality data from DBCLS SRA