SRX141252
GSM914083: T4 Myc ChIPSeq; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
T cells
NA
NA

Attributes by original data submitter

Sample

source_name
Resting T cells, conconavalin A (conA) activation for 4hrs
tissue
spleen
cell type
Resting T cells
antibody
Clontech, 632460

Sequenced DNA Library

library_name
GSM914083: T4_Myc_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
13855396
Reads aligned (%)
60.0
Duplicates removed (%)
16.9
Number of peaks
1285 (qval < 1E-05)

mm9

Number of total reads
13855396
Reads aligned (%)
60.0
Duplicates removed (%)
17.2
Number of peaks
1330 (qval < 1E-05)

Base call quality data from DBCLS SRA