SRX141251
GSM914082: B4 IgG ChIPSeq; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Quiescent B cells, lipopolysaccharide (LPS) treatment for 4hrs
tissue
spleen
cell type
Quiescent B cells
antibody
Santa Cruz SC-2025

Sequenced DNA Library

library_name
GSM914082: B4_IgG_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
13306582
Reads aligned (%)
55.0
Duplicates removed (%)
28.5
Number of peaks
167 (qval < 1E-05)

mm9

Number of total reads
13306582
Reads aligned (%)
55.0
Duplicates removed (%)
28.6
Number of peaks
160 (qval < 1E-05)

Base call quality data from DBCLS SRA