Antigen

Antigen Class

TFs and others

Antigen

Mxi1

Cell type

Cell type Class

Blood

Cell type

MEL

Tissue

Blood

Lineage

cellLine

Description

Leukemia (K562 analog)

Sample

source_name

MEL

biomaterial_provider

Weissman lab

lab

Stanford-m

lab description

Snyder - Stanford University

datatype

ChipSeq

datatype description

Chromatin IP Sequencing

cell

MEL

cell organism

mouse

cell description

Leukemia (K562 analog)

cell sex

M

antibody

Mxi1_(AF4185)

antibody antibodydescription

Goat IgG. Raised against E. coli-derived rhMxi1. Antibody Target: Mxi1

antibody targetdescription

Transcriptional repressor. Binds with MAX to form recognize the core sequence 5'-CAC[GA]TG-3', antagonizes MYC transcriptional activity by competing for MAX

antibody vendorname

R&D Systems

antibody vendorid

AF4185

treatment

None

treatment description

No special treatment or protocol applies

control

IgG-rab

control description

Input signal from Normal Rabbit IgG ChIP-seq.

age

immortalized

age description

Immortal cells

control

IgG-rab

control description

Input signal from Normal Rabbit IgG ChIP-seq.

controlid

MEL/None/Input/IgG-rab

replicate

1

strain

Unknown

strain description

Unknown strain origin

Sequenced DNA Library

library_name

GSM912928: Stanford_ChipSeq_MEL_Mxi1_(AF4185)_IgG-rab

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

64944615

Reads aligned (%)

83.9

Duplicates removed (%)

16.4

Number of peaks

41587 (qval < 1E-05)

mm9

Number of total reads

64944615

Reads aligned (%)

83.8

Duplicates removed (%)

16.4

Number of peaks

41650 (qval < 1E-05)