Antigen

Antigen Class

TFs and others

Antigen

Myb

Cell type

Cell type Class

Blood

Cell type

MEL

Tissue

Blood

Lineage

cellLine

Description

Leukemia (K562 analog)

Sample

source_name

MEL

biomaterial_provider

Weissman lab

lab

Stanford-m

lab description

Snyder - Stanford University

datatype

ChipSeq

datatype description

Chromatin IP Sequencing

cell

MEL

cell organism

mouse

cell description

Leukemia (K562 analog)

cell sex

M

antibody

c-Myb_(SC-7874)

antibody antibodydescription

Rabbit polyclonal IgG, Epitope corresponding to amino acids 500-640 mapping at the C-terminus of c-Myb of human origin. Antibody Target: c-Myb

antibody targetdescription

Transcriptional activator; DNA-binding protein that specifically recognize the sequence 5'-YAAC[GT]G-3'. Plays an important role in the control of proliferation and differentiation of hematopoietic progenitor cells.

antibody vendorname

Santa Cruz Biotech

antibody vendorid

sc-7874

treatment

None

treatment description

No special treatment or protocol applies

control

IgG-rab

control description

Input signal from Normal Rabbit IgG ChIP-seq.

age

immortalized

age description

Immortal cells

control

IgG-rab

control description

Input signal from Normal Rabbit IgG ChIP-seq.

controlid

MEL/None/Input/IgG-rab

replicate

1

strain

Unknown

strain description

Unknown strain origin

Sequenced DNA Library

library_name

GSM912903: Stanford_ChipSeq_MEL_c-Myb_(SC-7874)_IgG-rab

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

50357982

Reads aligned (%)

90.3

Duplicates removed (%)

17.8

Number of peaks

15018 (qval < 1E-05)

mm9

Number of total reads

50357982

Reads aligned (%)

90.1

Duplicates removed (%)

17.8

Number of peaks

15061 (qval < 1E-05)